At least you answer the question, the Assad government is legitimate (in your opinion) because it has a seat on the UN.
Now, reasons not to consider the Assad government legitimate include:
1)Syria is not a monarchy, yet Assad inhereted the presidency from his father.
2)Subsequent plebiscites gave him ridiculous majorities around the 98th percentile. Naturally, these elections were widely condemned worldwide except for the usual suspects that did not.
3)The most recent plebiscite, the only contested plebiscite in the history of Syria (contested in this context means there was someone else to vote for) won him a ridiculous majority around the 89th percentile. Naturally, this election was widely condemned worldwide except for the usual suspects that did not.
4)There is a fricken civil war going on.
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