I must admit that I'm still surprised that the microwave oven doesn't shield the cell phone effectively - their frequencies are not all that far apart.
I think it is fair to say that sound scientific studies do show that microwaves and other RF electromagnetic radiation can have an effect on organic tissue in addition to and/or other than thermal effects, but that there is no evidence that this makes microwaved food dangerous compared with food heated by other means - it' the temperature, distribution and duration of heat application that affect food safety, regardless of heating method, and that there is no evidence showing adverse effects on health of people located near microwave ovens in use.
What is the current status on scientific studies showing a connection between Alzheimer's and other brain disorders and exposure to microwaves or other electromagnetic fields? I've seen some study abstracts on the 'net, but I'm not well-versed in the interpretation of significance in clinical or epidemilogical studies (I'm but a structural engineer). From what I've seen, though, it appears that prolongued exposure to very strong fields may have adverse health effects, but that the fields encountered from cell phones, power grids, household cabling, electrical and electronic appliances (including microwave ovens) are so weak that no ill effects have been registered.