CCSP did note the discrepancy with tropospheric response in the tropics, and if this is noted in IPCC Chapter 9, as they say, as a fingerprint of GW of the CO2 induced variety, then the IPCC is wrong. The article is not on those available to me via the ejournal list, but here is the abstract.
A comparison of tropical temperature trends with model predictions (p n/a)
David H. Douglass, John R. Christy, Benjamin D. Pearson, S. Fred Singer
Published Online: Dec 5 2007 8:29AM
DOI: 10.1002/joc.1651
We examine tropospheric temperature trends of 67 runs from 22
http://www3.interscience.wiley.com/giflibrary/12/lsquo.gifClimate of the 20th Century
http://www3.interscience.wiley.com/giflibrary/12/rsquo.gif model simulations and try to reconcile them with the best available updated observations (in the tropics during the satellite era). Model results and observed temperature trends are in disagreement in most of the tropical troposphere, being separated by more than twice the uncertainty of the model mean. In layers near 5 km, the modelled trend is 100 to 300% higher than observed, and, above 8 km, modelled and observed trends have opposite signs. These conclusions contrast strongly with those of recent publications based on essentially the same data. Copyright © 2007 Royal Meteorological Society
IPCC Chapter 9, sections 9.4.4.3 and 9.4.4.4, page 701, discusses differences between free atmosphere and surface temperatures including in the tropics. It goes into the various uncertainties in some detail. As usual, one should look at the IPCC conclusions which may diverge from the uncertainty of the details discussed. No reason to do that until the PDF of the article surfaces and/or it is reviewed by various blogs (incomplete information at this point).