Annoying Creationists
I hope you all had a nice weekend.
I have acknowledged many times that ev does not include other possible mechanisms to explain genetic evolution such as recombinations, inversions, frame shift mutations and so on. However, the mathematical fact that ev removes random point mutations and natural selection as the key mechanism for macroevolution will undermine all other possible mechanisms. It is not impossible to mathematically model these other mechanisms. The most difficult part would be measuring accurate parametric data for use in such models such as numbers of frame shifts which are helpful and harmful and number of inversions which are helpful and harmful and so on and defining plausible selection mechanisms.
I think that you will find that point mutations and natural selection is the cornerstone of your theory. You have no other mechanism to explain the de novo evolution of a gene.
I have never claimed that random point mutations and natural selection is the only mechanism that can be used to explain macroevolution. I have only asserted that this mechanism is the cornerstone for the theory and that this mechanism is far too slow to explain macroevolution as shown by the results from this model when realistic parameters are used. I have also asserted that Dr Schneider’s claim of the evolution of the human genome in one billion years by the rate of information acquisition from his single published case of the evolution of 16 binding sites on a 256 base genome with a mutation rate of 1 mutation per 256 bases per generation is a preposterous extrapolation that does not warrant publication in any serious scientific journal.
Paul, the only problem I have with your extrapolations is that they are extremely inaccurate. Your extrapolations have improved but I have had to drag you kicking and screaming the whole way. That’s ok though, I have promised to be patient with you.
I am using Biblical arguments against the theory of evolution. I am using the many Biblical admonitions to measure and weigh to determine what is true. The mathematical arguments I raise here is measuring and weighing your theory. The measurements shown from ev show that the theory of evolution is lacking when placed on the mathematical scale.
I hope you all had a nice weekend.
Delphi, I have tried to be clear about my claims and I will repeat them again so you won’t be confused about what I am saying. I assert that Dr Schneider’s ev computer model of evolution by random point mutations and natural selection shows that when realistic parameters are used in the model that this mechanism is profoundly slow, too slow to explain macroevolution. This model also refutes key points of Gould’s hypothesis of punctuated equilibrium and also that huge populations such as those seen with bacterial colonies do not appear to have large impact in accelerating the evolutionary process.Hyparxis said:It's in regards to this model that was hailed as being an, if not complete and certainly simple, faithful simulation of the process of the Darwinian Theory of Evolution.Delphi oti said:If we're going for an entirely accurate model, that's going to be extremely difficult, maybe even impossible. But people are definitely working on these problems in bioinformatics and evolutionary computation. If our friend has something interesting to say, I'm certain people in those fields would listen.
I have acknowledged many times that ev does not include other possible mechanisms to explain genetic evolution such as recombinations, inversions, frame shift mutations and so on. However, the mathematical fact that ev removes random point mutations and natural selection as the key mechanism for macroevolution will undermine all other possible mechanisms. It is not impossible to mathematically model these other mechanisms. The most difficult part would be measuring accurate parametric data for use in such models such as numbers of frame shifts which are helpful and harmful and number of inversions which are helpful and harmful and so on and defining plausible selection mechanisms.
Delphi, there is a difference between you and me. When Dr Schneider made his claims about ev, I went ahead and did analysis of what he said and specifically point out the flaws in his analysis. Now you want to harp on this issue with Shannon information is mathematically equivalent to entropy or the negative of entropy. I told you to get the text Equilibrium Statistical Mechanics by Frank Andrews which is the source of my view. In that text, Andrews does an example very similar to Dr Schneider’s problem. If you study what Andrews is saying, you might have a better understanding of what I am saying. Delphi, you are getting close to understanding this point when you said:Hyparxis said:I'm being a bit of a Devil's advocate here, as "satan" as the the Book of Job put it. I'm naive enough to think that we might back away from the name calling to, if not agreeing on anything, valuing the process.Delphi oti said:I was more than willing to hear the man out until he proved he couldn't retract a very simple error.
Delphi oti said:To be completely correct, I should've been careful to distinguish between self information and average self information. Self information is about a single outcome. Average self information is averaged over a distribution, and is identical to Shannon information.
Dr Schneider believes his model simulates real life, so do the peer review editors at Nucleic Acids Research who published Dr Schneider’s extrapolation of the ev model to the evolution of a human genome. Are you trying to say that ev only simulates reality when unrealistic parameters are used in the model and should not be applied to reality when realistic parameters are used in the model?joozb said:The conclusion that kleinman generalizes it to real life is the problem.
Don’t forget, I’m annoying as well.joozb said:No, kleinman is just a noisy gong. loud and clangy but devoid of substance. He is of no use to anyone.
I believe the Bible is a totally believable and trustworthy book, but forget about me proving this to you mathematically. I will prove to you that macroevolution is mathematically impossible (at least my random point mutations and natural selection) using an evolutionist’s model.Kleinman said:I’m the “Annoying Creationist” Paul Anagnostopoulos is pissed off at.Beleth said:I'll take that as a Yes. How did you arrive at the Creationist conclusion?
Kleinman said:We don’t have to ignore the effects of mutagens, how high of a mutation rate to you think can be maintained in a living organism?Paul said:I don't know, but perhaps we have sex to show for it:
People on this forum have accused me of going about my proof backwards but this link you have posted has it sdrawkcab. They realize that it requires a high mutation rate in order to get sufficient numbers of genetic changes to explain the theory of evolution so they postulate this occurrence. There are a couple of obvious problems, the first is how do you get prokaryotic evolution and the second is that high mutation rates kill living things. But don’t let my arguments stop you, produce the laboratory data, add this affect to your mathematical model and show how macroevolution occurs mathematically.Kleinman said:
Now Paul, you know that ev does not simulate the evolution of a random gigabase genome. Why don’t you start ev with the genome from e coli except allow for 96 loci with a random distribution and then evolve your 16 binding sites using that initial condition and see whether ev converges more quickly.Paul said:What snag? The one where we agree that the diversity of life cannot arise solely from point mutations on random gigabase genomes in a few million years?
I think that you will find that point mutations and natural selection is the cornerstone of your theory. You have no other mechanism to explain the de novo evolution of a gene.
Darwin had no idea how complex living things are. He didn’t know they were irreducibly complex. If he had, I don’t think he would have extrapolated his observations the way he did.Paul said:What classic theory? The one where we agree that Darwin didn't have the whole story 150 years ago?
I believe Dr Schneider understands my case, this is why he won’t discuss this issue publicly. To the rest of you devout evolutionarians, this mathematical science that I am presenting to you will soak in over time.Paul said:By all means, Kleinman should make his case. I've been talking to him since June and I'm still waiting for the case.
I look forward to you proving the theory of evolution mathematically. Perhaps you will be the one to change the theory of evolution from a soft science of show and tell into a hard mathematical science. Dr Schneider came close but no prize, only refutation of the theory when realistic parameters are used in his model.Paul said:The one where we agree that the diversity of life cannot arise solely from point mutations on random gigabase genomes in a few million years?Delphi ote said:That's just the thing. Recent research has shown point mutation isn't the the only way genes get shifted around in natural evolution.
Delphi, I’m the “Annoying creationist” so use your skills in deductive logic to figure out what I believe is the mechanism which produced the "endless forms most beautiful". You have put your faith in mutation and natural selection as the explanation for this yet your view has huge mathematical scientific gaps.Delphi ote said:What is kleinman's answer? What does he think the underlying mechanisms are which produced the "endless forms most beautiful"? "Godddidit" is just an excuse for ignorance. How exactly did it happen?
Don’t worry, I won’t tell anyone. By the way, having a drink won’t help you deal with reality.Delphi ote said:I'm R. Cunningham.
Dr Schneider said:Likewise, at this rate, roughly an entire human genome of ~4 * 10^9 bits (assuming an average of 1 bit/base, which is clearly an overestimate) could evolve in a billion years, even without the advantages of large environmentally diverse worldwide populations, sexual recombination and interspecies genetic transfer. However, since this rate is unlikely to be maintained for eukaryotes, these factors are undoubtedly important in accounting for human evolution.Myriad said:"This rate" refers to the rate of information increase per generation shown by the ev model with the low-valued parameters that Kleinman is complaining about.
Welcome Myriad. It should be pointed out to the readers that Myriad is one of the few evolutionists who post on the Evolutionisdead forum who had the curiosity and intellectual courage to investigate what Dr Schneider model shows.Dr Schneider said:Myriad said:I just wanted to point out that not only did Dr. Schneider not claim that the ev model simulates all important factors in evolution, he explicitly stated the contrary. Kleinman usually leaves out the boldfaced sentence when he quotes this passage.
I have never claimed that random point mutations and natural selection is the only mechanism that can be used to explain macroevolution. I have only asserted that this mechanism is the cornerstone for the theory and that this mechanism is far too slow to explain macroevolution as shown by the results from this model when realistic parameters are used. I have also asserted that Dr Schneider’s claim of the evolution of the human genome in one billion years by the rate of information acquisition from his single published case of the evolution of 16 binding sites on a 256 base genome with a mutation rate of 1 mutation per 256 bases per generation is a preposterous extrapolation that does not warrant publication in any serious scientific journal.
How long are you going to talk about do this before you actually do it? Is our friendly wager about jiggling the threshold and increasing the rate of convergence still on?Myriad said:P.S. I've been playing around with the model. The curve of generations to convergence depends on the details of the selection mechanism. Change it so that ties are won by the bug whose worst mistake (greatest absolute value of the difference between the binding strength value from the weight matrix and the threshold) is less than the other bug's worst mistake, and the convergence time becomes (at least approximately) linear with respect to the genome length.
Myriad, I went back and looked at where I have quoted the above text written by Dr Schneider. I have quoted this text 11 times on the Evolutionisdead forum and 2 times on this forum and in all cases I have included the boldfaced sentence. So stop being a jackass. If you are going to attribute something to me, post the quote.Myriad said:Kleinman usually leaves out the boldfaced sentence when he quotes this passage.
I’m not sure what probabilities you are trying to compute. If you are trying to get an idea of what Dr Schneider ev model is simulating by looking at his model as a simplified probabilistic model, then you will find population has less than an additive affect on the probabilities of a mutation occurring at the proper locus. Genome length has a multiplicative effect on the probabilities involved in this problem and mutation rate has at best an additive affect. Genome length is the dominant parameter in this probability problem.Paul said:We don't know this, because we haven't modeled more than a measly million creatures. You won't let me extrapolate using that fitted curve, but if I did extrapolate to a lousy billion creatures, it would require 103 generations; to a trillion creatures, 21 generations. Of course, there is some asymptote it's approaching, although I haven't the slightest idea what that is.Dr Adequate said:The mistake Kleinman has made, or one of them, is to take a realistic value for p (the probability of a point mutation for a given base) but not for n (the population). This gives a totally unrealistic value for the probability that a given substition will occur in the gene pool per generation, which is given by:
Paul, the only problem I have with your extrapolations is that they are extremely inaccurate. Your extrapolations have improved but I have had to drag you kicking and screaming the whole way. That’s ok though, I have promised to be patient with you.
I happen to agree with the above quote but I also know that there are many different ways people interpret the Scriptures. Even evolutionists who believe very little in the Bible think that when they quote it, they got it right.By definition, no apparent, perceived or claimed evidence in any field, including history and chronology, can be valid if it contradicts the Scriptural record.Kopji said:I think you guys are great but at the end of the day you are talking to yourselves. Creationists are not arguing from a position of intellectual integrity where they might ever be wrong if you provided evidence.
I am using Biblical arguments against the theory of evolution. I am using the many Biblical admonitions to measure and weigh to determine what is true. The mathematical arguments I raise here is measuring and weighing your theory. The measurements shown from ev show that the theory of evolution is lacking when placed on the mathematical scale.
