In your simplistic view of the universe, in which momentum vanishes into nothingness and all structures of all shapes and sizes behave exactly the same, I imagine it would be easy. Especially when you can redefine your terms at will to allow reality to fall into place with your ideals -- in your mind, at least.
Most people who deal professionally with momentum and structures, however, have to contend with the universe we've got, and the laws it imposes on us.
Yes, the momentum (mass times velocity) of a moving object C is affected when C collides with another object A.
Most, >99.9%, structural engineers do static and dynamic analysises of intact structures just to confirm that they will remain intact in service. Some structures can also be tested full-scale and the result compared with theoretical ones. A few engineers do real structural crush tests of various kind, e.g. testing car bodies and also ship structures subject to collision. In these tests the moving object always come to a standstill, i.e. its momentum becomes zero. Also the stricken object normally comes to a standstill afterwards, i.e. its momentum is zero. What the momentums are during collision is of little interest! More interesting are the forces involved acting on the objects and energies applied and absorbed and associated deformations and defects.
In the special case where moving object C (not connected to anything) has same structure as stricken object A (connected to e.g. ground) and when mass A > mass C, it is easy to show that deformations of C and A are of similar magnitudes and that C cannot one-way crush down A.
C cannot apply greater forces on A than C itself can withstand. In the WTC 1 case, where C evidently is weaker than A (A carried C before, but C could not carry A) it should be clear that C cannot one-way crush A! C is too weak to accomplish it!
If, on the other hand, you assume, like Bazant and NIST, that little C is rigid and much stronger than big A (not rigid and weak - cannot absorb strain energy), then you can prove anything ... but it has nothing to do with the real world and correct structural damage analysis.
I wonder why Bazant was so quick to demonstrate the impossible? And why NIST jumped on this obvious false conclusions of zero scientific value?